Package: umap 0.2.11.0

umap: Uniform Manifold Approximation and Projection

Uniform manifold approximation and projection is a technique for dimension reduction. The algorithm was described by McInnes and Healy (2018) in <arxiv:1802.03426>. This package provides an interface for two implementations. One is written from scratch, including components for nearest-neighbor search and for embedding. The second implementation is a wrapper for 'python' package 'umap-learn' (requires separate installation, see vignette for more details).

Authors:Tomasz Konopka [aut, cre]

umap_0.2.11.0.tar.gz
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umap_0.2.11.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
umap/json (API)

# Install 'umap' in R:
install.packages('umap', repos = c('https://tkonopka.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tkonopka/umap/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

dimensionality-reductionumapcpp

13.20 score 136 stars 59 packages 5.8k scripts 11k downloads 24 mentions 3 exports 17 dependencies

Last updated from:9106cac8de. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK171
linux-devel-x86_64OK167
source / vignettesOK177
linux-release-arm64OK167
linux-release-x86_64OK169
macos-release-arm64OK221
macos-release-x86_64OK323
macos-oldrel-arm64OK196
macos-oldrel-x86_64OK411
windows-develOK178
windows-releaseOK211
windows-oldrelOK167
wasm-releaseOK150

Exports:umapumap.defaultsumap.knn

Dependencies:askpassherejsonlitelatticeMatrixopensslpngrappdirsRcppRcppEigenRcppTOMLreticulaterlangrprojrootRSpectrasyswithr

Uniform Manifold Approximation and Projection in R
Introduction | Overview | Creating a projection | Projecting new data | Tuning | Configuration objects | Additional arguments | Input types | Stability and reproducibility | Initial embedding | Prediction | Implementations | Appendix
Rendered fromumap.Rmdusingknitr::rmarkdown

Last update: 2023-02-01
Started: 2018-05-05

Interfacing with 'umap-learn'
Introduction | Usage | Tuning umap-learn | Discussion | Verifying arguments | Versions | Custom constructors | Appendix
Rendered fromumap_learn.Rmdusingknitr::rmarkdown

Last update: 2023-01-27
Started: 2018-07-16